Detailed information of matrix profile MA2152.1

Profile summary

Name: ref-1
Matrix ID: MA2152.1
Class: Basic helix-loop-helix factors (bHLH)
Family: Hairy-related factors
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 15935776
Uniprot ID: G5EEQ5  
Source: 19632181
Comment: Class and TF information inffered based on sequence similarity search using DELTA-BLAST within Nr. database and limiting the search to vertebrates

Sequence logo

Frequency matrix

A [ 667 0 944 0 0 0 0 0 ]
C [ 250 1000 0 1000 0 0 0 583 ]
G [ 83 0 56 0 1000 0 1000 333 ]
T [ 0 0 0 0 0 1000 0 83 ]

Binding sites information

No Binding sites available for this model.

External links