Detailed information of matrix profile MA2162.1

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Profile summary
Name: ceh-60
Matrix ID: MA2162.1
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 30956009
Uniprot ID: Q45EK2  
Source: GTRD
Comment:

Sequence logo

Frequency matrix

         
A [ 427 225 3174 156 133 21 2336 55 2780 ]
C [ 156 41 18 59 41 10 33 3001 40 ]
G [ 88 2882 31 171 110 3215 845 25 354 ]
T [ 2602 125 50 2887 2989 27 59 192 99 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2162.1 MA2162 1 ceh-60 Caenorhabditis elegans
TALE-type homeo domain factors Homeo domain factors
     

-log(P-value) = 266.451

TFFM details

TFFM ID: TFFM1002.1

ChIP-seq Centrality
-log(P-value): 2497.91

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1002.1

ChIP-seq Centrality
-log(P-value): 2069.59

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: