Detailed information of matrix profile MA2170.1

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Profile summary
Name: lin-32
Matrix ID: MA2170.1
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 11076762
Uniprot ID: Q10574  
Source: GTRD
Comment:

Sequence logo

Frequency matrix

         
A [ 147 2 463 5 25 6 7 5 ]
C [ 311 485 8 150 455 11 15 91 ]
G [ 22 1 11 49 7 5 463 40 ]
T [ 9 1 7 285 2 467 4 353 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2170.1 MA2170 1 lin-32 Caenorhabditis elegans
Tal-related Basic helix-loop-helix factors (bHLH)
     

-log(P-value) = 45.8791

TFFM details

TFFM ID: TFFM1004.1

ChIP-seq Centrality
-log(P-value): 298.557

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1004.1

ChIP-seq Centrality
-log(P-value): 301.434

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: