Detailed information of matrix profile MA2171.1

Profile summary

Name: lsl-1
Matrix ID: MA2171.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 25905672
Uniprot ID: O02273  
Source: GTRD
Comment: Class and TF information inffered based on sequence similarity search using DELTA-BLAST within Nr. database and limiting the search to vertebrates

Sequence logo

Frequency matrix

A [ 122 22 1144 7 512 21 13 1132 465 88 131 ]
C [ 765 43 12 1148 515 11 8 17 376 610 825 ]
G [ 111 30 6 5 74 1127 3 9 217 60 38 ]
T [ 169 1072 5 7 66 8 1143 9 109 409 173 ]

Binding sites information

External links