Detailed information of matrix profile MA2179.1

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Profile summary
Name: ceh-10
Matrix ID: MA2179.1
Class: Homeo domain factors
Family: Paired-related HD factors
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: yeast 1-hybrid
Validation: 7789259
Uniprot ID: P41935  
Source: 27777270
Comment: Similar motif from profile inference.

Sequence logo

Frequency matrix

         
A [ 75 47 85 91 8 0 64 25 36 55 33 ]
C [ 0 0 0 0 0 8 0 7 50 11 0 ]
G [ 8 0 7 8 0 0 0 39 0 11 22 ]
T [ 16 52 7 0 91 91 35 28 13 22 44 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2179.1 MA2179 1 ceh-10 Caenorhabditis elegans
Paired-related HD factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: