Detailed information of matrix profile MA2212.1

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Profile summary
Name: dar1
Matrix ID: MA2212.1
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: bacterial 1-hybrid
Validation: 30188612
Uniprot ID: Q9VZN4  
Source: 21097781
Comment: Similar motif from profile inference.

Sequence logo

Frequency matrix

         
A [ 250 200 0 800 0 850 0 0 0 650 200 ]
C [ 0 700 1000 100 1000 0 1000 1000 1000 150 550 ]
G [ 750 100 0 100 0 100 0 0 0 0 50 ]
T [ 0 0 0 0 0 50 0 0 0 200 200 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2212.1 MA2212 1 dar1 Drosophila melanogaster
Three-zinc finger Kruppel-related C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: