Detailed information of matrix profile MA2273.1

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Profile summary
Name: Sox102F
Matrix ID: MA2273.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: SELEX
Validation: 30190506
Uniprot ID: Q59DN5  
Source: 25779349
Comment: Similar motif from profile inference.

Sequence logo

Frequency matrix

         
A [ 754 21 0 0 7 0 29 9 36 62 58 91 ]
C [ 9 160 49 0 0 16 947 26 6 20 42 56 ]
G [ 74 105 27 1000 33 43 23 962 912 96 816 637 ]
T [ 161 712 923 0 959 940 0 2 43 820 82 214 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2273.1 MA2273 1 Sox102F Drosophila melanogaster
SOX-related factors High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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