Detailed information of matrix profile MA2348.1

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Profile summary
Name: IDD6
Matrix ID: MA2348.1
Class: C2H2 zinc finger factors
Family: IDD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24039602
Uniprot ID: Q8RWX7  
Source: 27203113
Comment: Also known as BLJ

Sequence logo

Frequency matrix

         
A [ 297 694 99 706 830 785 896 223 12 929 4 971 991 954 789 549 ]
C [ 483 16 446 4 24 53 57 636 0 61 991 4 0 20 45 115 ]
G [ 61 272 367 20 0 132 37 86 979 8 4 24 8 24 61 95 ]
T [ 157 16 86 268 144 28 8 53 8 0 0 0 0 0 103 239 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2348.1 MA2348 1 IDD6 Arabidopsis thaliana
IDD C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: