Detailed information of matrix profile MA2376.1

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Profile summary
Name: CAMTA5
Matrix ID: MA2376.1
Class: GCM domain factors
Family: CAMTA
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 17689537
Uniprot ID: O23463  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 140 110 88 121 65 306 341 396 493 430 381 43 10 36 10 10 ]
C [ 595 95 380 20 31 181 135 95 141 148 305 930 0 500 0 20 ]
G [ 140 708 86 731 171 273 213 288 120 181 260 10 990 0 963 83 ]
T [ 125 86 445 126 731 238 310 220 245 240 53 16 0 463 26 886 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2376.1 MA2376 1 CAMTA5 Arabidopsis thaliana
CAMTA GCM domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Included Models:

GC Content: