Detailed information of matrix profile MA2388.1

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Profile summary
Name: GATA1
Matrix ID: MA2388.1
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12504119
Uniprot ID: Q8LAU9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 588 429 76 0 605 11 1000 0 0 21 ]
C [ 72 25 360 500 96 0 0 0 998 116 ]
G [ 292 60 32 28 297 988 0 0 0 55 ]
T [ 45 483 531 470 0 0 0 1000 1 805 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2388.1 MA2388 1 GATA1 Arabidopsis thaliana
C4-GATA-related Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: