Detailed information of matrix profile MA2408.1

  1. Home
  2. Matrix > MA2408.1

Profile summary
Name: BAD1
Matrix ID: MA2408.1
Class: TCP
Family:
Collection: CORE
Taxon: Plants
Species: Zea mays
Data Type: DAP-seq
Validation: 21241251
Uniprot ID: B4F7W2  
Source: GSE120304
Comment:

Sequence logo

Frequency matrix

         
A [ 816 124 155 22 47 88 166 40 21 30 50 19 ]
C [ 571 2993 2239 169 64 1189 2150 6875 6871 5361 62 168 ]
G [ 6068 1531 3615 7370 7541 6378 4866 18 783 2124 7530 7412 ]
T [ 229 3036 1675 123 32 29 502 751 9 169 42 85 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2408.1 MA2408 1 BAD1 Zea mays
TCP
     

-log(P-value) = 20208.7

TFFM details

TFFM ID: TFFM1034.1

ChIP-seq Centrality
-log(P-value): 38770.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1034.1

ChIP-seq Centrality
-log(P-value): 39247.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: