Detailed information of matrix profile MA2415.1

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Profile summary
Name: EREB138
Matrix ID: MA2415.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Zea mays
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: A0A060D2G6  
Source: GSE120304
Comment:

Sequence logo

Frequency matrix

         
A [ 718 3337 114 77 186 189 57 78 5531 193 ]
C [ 3513 2127 183 6069 5826 156 6075 6124 154 446 ]
G [ 1178 539 5958 134 242 5888 128 99 588 357 ]
T [ 947 353 101 76 102 123 96 55 83 5360 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2415.1 MA2415 1 EREB138 Zea mays
ERF/DREB AP2/EREBP
     

-log(P-value) = 20026.0

TFFM details

TFFM ID: TFFM1041.1

ChIP-seq Centrality
-log(P-value): 25539.6

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1041.1

ChIP-seq Centrality
-log(P-value): 17551.7

TFFM detailed summary logos

Description:

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GC Content: