Detailed information of matrix profile MA2420.1

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Profile summary
Name: SBP6
Matrix ID: MA2420.1
Class: C3H(C),C2HC zinc-fingers like factors
Family: SBP
Collection: CORE
Taxon: Plants
Species: Zea mays
Data Type: DAP-seq
Validation: 16554053
Uniprot ID: Q9SM14  
Source: GSE120304
Comment:

Sequence logo

Frequency matrix

         
A [ 1247 484 69 64 12510 586 261 607 ]
C [ 490 330 42 66 479 12390 1425 1080 ]
G [ 891 339 12922 51 55 62 290 376 ]
T [ 10537 12012 132 12984 121 127 11189 11102 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2420.1 MA2420 1 SBP6 Zea mays
SBP C3H(C),C2HC zinc-fingers like factors
     

-log(P-value) = 16365.1

TFFM details

TFFM ID: TFFM1046.1

ChIP-seq Centrality
-log(P-value): 22673.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1046.1

ChIP-seq Centrality
-log(P-value): 22551.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: