Detailed information of matrix profile MA2437.1

  1. Home
  2. Matrix > MA2437.1

Profile summary
Name: SPL19B
Matrix ID: MA2437.1
Class: C3H(C),C2HC zinc-fingers like factors
Family: SBP
Collection: CORE
Taxon: Plants
Species: Triticum aestivum
Data Type: DAP-seq
Validation: 16554053
Uniprot ID:  
Source: GSE188699
Comment:

Sequence logo

Frequency matrix

         
A [ 7299 1305 3409 843 911 63971 365 824 64565 496 936 5986 2337 ]
C [ 1704 60997 1564 954 2364 685 22560 648 325 64661 61329 1424 50959 ]
G [ 56847 504 60980 64378 569 780 43745 723 1212 1083 1501 52557 4640 ]
T [ 1123 4167 1020 798 63129 1537 303 64778 871 733 3207 7006 9037 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2437.1 MA2437 1 SPL19B Triticum aestivum
SBP C3H(C),C2HC zinc-fingers like factors
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM1059.1

ChIP-seq Centrality
-log(P-value): 316.321

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1059.1

ChIP-seq Centrality
-log(P-value): 143.828

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: