Detailed information of matrix profile PL0009.1

Profile summary

Name: hlh-26
Matrix ID: PL0009.1
Class: Zipper-type
Family: Helix-Loop-Helix
Collection: PBM_HLH
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 19632181
Uniprot ID: Q18053  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source:
Comment: homodimer

Sequence logo

Frequency matrix

A [ 23 41 29 18 42 0 82 0 2 1 0 1 5 24 32 34 30 ]
C [ 23 14 20 7 1 95 1 97 0 3 0 19 67 31 18 22 9 ]
G [ 24 22 19 53 55 0 11 0 95 0 97 2 3 17 17 21 20 ]
T [ 29 21 30 20 0 2 4 1 0 94 1 75 23 25 31 20 39 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.

External links