Detailed information of matrix profile UN0442.1

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Profile summary

Name: Atf4-5
Matrix ID: UN0442.1
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H3V9  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 290 273 273 230 173 437 55 25 917 10 149 30 127 965 22 209 213 256 247 255 255 240 ]
C [ 207 226 221 150 171 298 63 62 13 821 11 34 817 7 170 438 419 248 254 239 244 267 ]
G [ 254 257 244 416 437 215 35 763 43 12 832 11 37 18 220 180 143 222 227 203 220 239 ]
T [ 249 245 262 204 219 50 847 150 26 157 9 924 19 10 588 173 225 275 271 302 281 254 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0442.1 UN0442 1 Atf4-5 Ciona intestinalis
Jun-related Basic leucine zipper factors (bZIP)
UN0442.2 UN0442 2 Atf4-5 Ciona intestinalis
Jun-related Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: