Detailed information of matrix profile UN0452.1

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Profile summary

Name: Glis
Matrix ID: UN0452.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 194 168 171 161 136 144 116 71 11 8 34 14 31 55 166 229 222 214 203 199 200 200 ]
C [ 221 294 247 262 270 209 197 36 8 7 9 20 43 123 463 207 186 183 184 187 189 193 ]
G [ 327 301 298 288 326 468 464 821 937 965 906 923 834 261 210 295 301 307 318 325 338 336 ]
T [ 258 237 285 289 269 180 223 72 45 20 50 42 92 562 161 269 290 296 295 289 273 272 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0452.1 UN0452 1 Glis Ciona intestinalis
More than 3 adjacent zinc fingers C2H2 zinc finger factors
UN0452.2 UN0452 2 Glis Ciona intestinalis
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: