Detailed information of matrix profile UN0470.2

  1. Home
  2. Matrix > UN0470.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: Srf
Matrix ID: UN0470.2
Class: MADS box factors
Family: Regulators of differentiation
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2R3  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 39 24 810 84 850 93 497 248 222 133 ]
C [ 905 899 41 24 31 62 101 190 68 130 ]
G [ 31 14 51 12 53 26 146 196 643 581 ]
T [ 25 63 98 880 66 819 257 366 67 157 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0470.1 UN0470 1 Srf Ciona intestinalis
Regulators of differentiation MADS box factors
UN0470.2 UN0470 2 Srf Ciona intestinalis
Regulators of differentiation MADS box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: