Detailed information of matrix profile UN0472.1

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Profile summary

Name: xBP-a
Matrix ID: UN0472.1
Class: Basic leucine zipper factors (bZIP)
Family: XBP-1-related factors
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 281 329 481 372 148 139 505 9 985 3 18 9 156 594 126 148 326 270 305 314 ]
C [ 176 158 107 112 142 71 336 853 3 989 8 8 635 69 326 553 248 217 173 223 ]
G [ 241 205 122 224 510 646 28 94 9 2 969 4 181 143 186 124 182 125 134 166 ]
T [ 303 308 290 292 201 143 131 43 3 6 5 978 28 194 363 175 243 388 388 297 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0472.1 UN0472 1 xBP-a Ciona intestinalis
XBP-1-related factors Basic leucine zipper factors (bZIP)
UN0472.2 UN0472 2 xBP-a Ciona intestinalis
XBP-1-related factors Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: