Detailed information of matrix profile UN0541.1

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Profile summary

Name: GCM1::ELK1
Matrix ID: UN0541.1
Class: GCM domain factors::Tryptophan cluster factors
Family: GCM::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P19420   Q9NP62  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 1362 372 817 1308 338 19 0 29 3 0 2415 2415 612 761 491 ]
C [ 318 375 205 2415 19 0 8 2415 0 0 71 56 228 1579 323 ]
G [ 1053 545 2415 1124 2415 2415 2415 23 2415 2415 11 37 2415 1790 1166 ]
T [ 326 2415 14 1613 159 0 0 6 0 0 58 671 0 2415 435 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0541.1 UN0541 1 GCM1::ELK1 Homo sapiens
GCM::Ets-related GCM domain factors::Tryptophan cluster factors
UN0541.2 UN0541 2 GCM1::ELK1 Homo sapiens
GCM::Ets-related GCM domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: