Detailed information of matrix profile UN0547.1

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Profile summary

Name: GCM1::HOXB13
Matrix ID: UN0547.1
Class: GCM domain factors::Homeo domain factors
Family: GCM::HOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q92826   Q9NP62  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 619 47 284 162 49 2 2 0 808 966 0 914 958 915 335 ]
C [ 54 58 21 796 20 3 1 55 524 17 48 28 2 119 255 ]
G [ 342 19 900 149 948 989 991 21 3 44 13 74 41 115 235 ]
T [ 96 969 0 197 90 19 4 962 49 8 969 192 52 111 163 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0546.1 UN0546 1 GCM1::HOXB13 Homo sapiens
GCM::HOX GCM domain factors::Homeo domain factors
UN0547.1 UN0547 1 GCM1::HOXB13 Homo sapiens
GCM::HOX GCM domain factors::Homeo domain factors
UN0546.2 UN0546 2 GCM1::HOXB13 Homo sapiens
GCM::HOX GCM domain factors::Homeo domain factors
UN0547.2 UN0547 2 GCM1::HOXB13 Homo sapiens
GCM::HOX GCM domain factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: