Detailed information of matrix profile UN0548.1

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Profile summary

Name: GCM1::ONECUT2
Matrix ID: UN0548.1
Class: GCM domain factors::Homeo domain factors
Family: GCM::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O95948   Q9NP62  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 1314 146 541 422 121 4 16 819 1660 1886 34 17 610 2080 48 1102 ]
C [ 245 250 93 2080 44 8 0 349 19 1 43 2080 102 9 20 452 ]
G [ 766 192 2080 601 2080 2080 2080 407 304 109 24 10 2080 52 14 978 ]
T [ 116 2080 11 660 100 34 4 505 96 84 2080 7 70 317 2080 489 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0548.1 UN0548 1 GCM1::ONECUT2 Homo sapiens
GCM::HD-CUT GCM domain factors::Homeo domain factors
UN0548.2 UN0548 2 GCM1::ONECUT2 Homo sapiens
GCM::HD-CUT GCM domain factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: