Detailed information of matrix profile UN0548.2

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Profile summary

Name: GCM1::ONECUT2
Matrix ID: UN0548.2
Class: GCM domain factors::Homeo domain factors
Family: GCM::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O95948   Q9NP62  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 2080 317 70 7 2080 84 96 505 4 34 100 660 11 2080 116 ]
C [ 14 52 2080 10 24 109 304 407 2080 2080 2080 601 2080 192 766 ]
G [ 20 9 102 2080 43 1 19 349 0 8 44 2080 93 250 245 ]
T [ 48 2080 610 17 34 1886 1660 819 16 4 121 422 541 146 1314 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0548.1 UN0548 1 GCM1::ONECUT2 Homo sapiens
GCM::HD-CUT GCM domain factors::Homeo domain factors
UN0548.2 UN0548 2 GCM1::ONECUT2 Homo sapiens
GCM::HD-CUT GCM domain factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: