Detailed information of matrix profile UN0550.2

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Profile summary

Name: GCM1::TBX21
Matrix ID: UN0550.2
Class: GCM domain factors::T-Box factors
Family: GCM::TBrain-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q9NP62   Q9UL17  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 1588 232 0 55 29 278 140 916 122 189 117 51 2 26 ]
C [ 210 206 48 494 1 183 703 83 26 20 1588 0 3 0 ]
G [ 448 1588 1588 186 1588 311 485 671 211 1399 343 1588 1588 1588 ]
T [ 351 214 72 1588 21 1588 259 12 1588 2 289 16 17 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0550.1 UN0550 1 GCM1::TBX21 Homo sapiens
GCM::TBrain-related factors GCM domain factors::T-Box factors
UN0550.2 UN0550 2 GCM1::TBX21 Homo sapiens
GCM::TBrain-related factors GCM domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: