Detailed information of matrix profile UN0551.1

  1. Home
  2. Matrix > UN0551.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: GCM2::DRGX
Matrix ID: UN0551.1
Class: GCM domain factors::Paired-related HD factors
Family: GCM::Paired-related HD factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: A6NNA5   O75603  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 682 941 2880 2880 273 1238 1861 43 24 302 207 0 2880 138 ]
C [ 1092 392 190 449 262 773 164 2880 2880 2880 919 1639 235 840 ]
G [ 461 135 319 77 245 879 544 6 0 27 1961 205 208 253 ]
T [ 645 2880 513 220 2880 2880 310 28 0 192 528 1241 140 2040 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0551.1 UN0551 1 GCM2::DRGX Homo sapiens
GCM::Paired-related HD factors GCM domain factors::Paired-related HD factors
UN0551.2 UN0551 2 GCM2::DRGX Homo sapiens
GCM::Paired-related HD factors GCM domain factors::Paired-related HD factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: