Detailed information of matrix profile UN0553.1

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Profile summary

Name: GCM2::HOXA13
Matrix ID: UN0553.1
Class: GCM domain factors::Homeo domain factors
Family: GCM::HOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O75603   P31271  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 936 726 835 1602 7103 629 837 6984 0 0 60 653 39 7121 191 ]
C [ 989 648 356 953 584 471 190 140 7186 7191 7104 798 5208 72 1108 ]
G [ 1656 624 297 345 366 356 1975 782 0 0 37 5940 92 122 695 ]
T [ 3604 6817 7045 6742 279 7063 6107 84 0 0 157 973 1924 215 5476 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0553.1 UN0553 1 GCM2::HOXA13 Homo sapiens
GCM::HOX GCM domain factors::Homeo domain factors
UN0553.2 UN0553 2 GCM2::HOXA13 Homo sapiens
GCM::HOX GCM domain factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: