Detailed information of matrix profile UN0554.1

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Profile summary

Name: GCM2::PITX1
Matrix ID: UN0554.1
Class: GCM domain factors::Homeo domain factors
Family: GCM::Paired-related HD factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O75603   P78337  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 4134 766 2033 3425 1538 0 7 588 53 6672 0 670 6672 1756 ]
C [ 1557 996 719 6672 17 0 12 3401 74 1562 146 585 205 1037 ]
G [ 2538 646 4639 1641 6672 6672 6672 3271 6672 149 44 133 523 2372 ]
T [ 702 6672 18 2618 740 0 23 766 250 128 6672 6672 1556 1507 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0554.1 UN0554 1 GCM2::PITX1 Homo sapiens
GCM::Paired-related HD factors GCM domain factors::Homeo domain factors
UN0554.2 UN0554 2 GCM2::PITX1 Homo sapiens
GCM::Paired-related HD factors GCM domain factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: