Detailed information of matrix profile UN0554.2

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Profile summary

Name: GCM2::PITX1
Matrix ID: UN0554.2
Class: GCM domain factors::Homeo domain factors
Family: GCM::Paired-related HD factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O75603   P78337  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 1556 6672 6672 128 250 766 23 0 740 2618 18 6672 ]
C [ 523 133 44 149 6672 3271 6672 6672 6672 1641 4639 646 ]
G [ 205 585 146 1562 74 3401 12 0 17 6672 719 996 ]
T [ 6672 670 0 6672 53 588 7 0 1538 3425 2033 766 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0554.1 UN0554 1 GCM2::PITX1 Homo sapiens
GCM::Paired-related HD factors GCM domain factors::Homeo domain factors
UN0554.2 UN0554 2 GCM2::PITX1 Homo sapiens
GCM::Paired-related HD factors GCM domain factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: