Detailed information of matrix profile UN0555.2

  1. Home
  2. Matrix > UN0555.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: GCM2::TBX21
Matrix ID: UN0555.2
Class: GCM domain factors::T-Box factors
Family: GCM::TBrain-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O75603   Q9UL17  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 39 40 227 653 65 2416 29 384 4220 0 4220 0 805 1207 ]
C [ 4220 4220 4220 2379 4220 11 1556 959 439 4220 351 4220 4220 723 ]
G [ 31 7 47 1842 173 25 35 2552 87 18 33 0 152 244 ]
T [ 225 23 124 583 1077 1768 2600 325 731 233 0 86 553 4220 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0555.1 UN0555 1 GCM2::TBX21 Homo sapiens
GCM::TBrain-related factors GCM domain factors::T-Box factors
UN0555.2 UN0555 2 GCM2::TBX21 Homo sapiens
GCM::TBrain-related factors GCM domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: