Detailed information of matrix profile UN0566.1

  1. Home
  2. Matrix > UN0566.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: HOXC10::TBX21
Matrix ID: UN0566.1
Class: Homeo domain factors::T-Box factors
Family: HOX::TBrain-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q9NYD6   Q9UL17  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 25 391 400 0 686 123 116 12 254 686 8 493 686 686 ]
C [ 78 294 11 686 14 686 398 136 432 0 5 2 0 61 ]
G [ 20 21 286 0 177 17 86 7 58 69 28 0 0 1 ]
T [ 686 43 55 0 8 10 288 686 0 42 686 192 27 74 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0566.1 UN0566 1 HOXC10::TBX21 Homo sapiens
HOX::TBrain-related factors Homeo domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: