Detailed information of matrix profile UN0569.1

  1. Home
  2. Matrix > UN0569.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: HOXD12::ETV4
Matrix ID: UN0569.1
Class: Homeo domain factors::Tryptophan cluster factors
Family: HOX::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P35452   P43268  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 21687 3054 959 30 38 29910 29910 1235 31 737 2494 8 29910 29910 29910 15982 ]
C [ 5083 22994 29910 23 15 33 704 49 63 29910 38 31 156 0 519 7875 ]
G [ 8222 6916 45 29910 29910 15 15 29910 168 7 29910 31 0 8 30 1847 ]
T [ 5689 290 10 15 30 15 1358 8 29910 8595 65 29910 10617 58 692 4206 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0569.1 UN0569 1 HOXD12::ETV4 Homo sapiens
HOX::Ets-related Homeo domain factors::Tryptophan cluster factors
UN0569.2 UN0569 2 HOXD12::ETV4 Homo sapiens
HOX::Ets-related Homeo domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: