Detailed information of matrix profile UN0627.1

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Profile summary

Name: ZNF540
Matrix ID: UN0627.1
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type:
Validation:
Uniprot ID: Q8NDQ6  
Source: ReMap
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 8 7 21 20 21 0 0 0 2 1 16 1 ]
C [ 2 8 0 0 0 22 0 0 16 16 1 16 ]
G [ 10 1 1 2 0 0 22 0 1 0 4 1 ]
T [ 2 6 0 0 1 0 0 22 3 5 1 4 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0627.1 UN0627 1 ZNF540 Homo sapiens
C2H2 zinc finger factors
UN0627.2 UN0627 2 ZNF540 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     

-log(P-value) = 0.766617

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: