Detailed information of matrix profile UN0688.2

  1. Home
  2. Matrix > UN0688.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: BHLH10
Matrix ID: UN0688.2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation:
Uniprot ID: Q84TK1  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 48 31 308 9 3 10 487 7 537 111 ]
C [ 412 492 1 589 601 1 78 591 7 360 ]
G [ 42 17 293 7 2 593 16 4 48 62 ]
T [ 105 67 5 2 1 3 26 5 15 74 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0688.1 UN0688 1 BHLH10 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
UN0688.2 UN0688 2 BHLH10 Arabidopsis thaliana
bHLH Basic helix-loop-helix factors (bHLH)
     

-log(P-value) = 478.174

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: