Detailed information of matrix profile UN0702.1

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Profile summary

Name: F52B5.7
Matrix ID: UN0702.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation:
Uniprot ID: Q7YWZ7  
Source: 25905672
Comment: Class and TF information inffered based on sequence similarity search using DELTA-BLAST within Nr. database and limiting the search to vertebrates

Sequence logo

Frequency matrix

         
A [ 150 10 10 989 0 556 349 ]
C [ 699 967 978 0 0 0 50 ]
G [ 12 0 0 0 0 404 516 ]
T [ 137 21 10 10 999 38 83 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0702.1 UN0702 1 F52B5.7 Caenorhabditis elegans
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: