Detailed information of matrix profile UN0710.1

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Profile summary

Name: madf-9
Matrix ID: UN0710.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation:
Uniprot ID: H2KZH8  
Source: 25215497
Comment: Same motif found in different species in the same paper.

Sequence logo

Frequency matrix

         
A [ 176 138 68 0 0 0 305 98 ]
C [ 33 33 894 1000 0 948 0 220 ]
G [ 165 98 38 0 1000 52 678 134 ]
T [ 626 732 0 0 0 0 17 549 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0710.1 UN0710 1 madf-9 Caenorhabditis elegans
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: