Detailed information of matrix profile UN0711.1

  1. Home
  2. Matrix > UN0711.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: nhr-1
Matrix ID: UN0711.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation:
Uniprot ID: Q21878  
Source: 25905672
Comment:

Sequence logo

Frequency matrix

         
A [ 844 263 84 0 999 0 0 999 ]
C [ 1 106 42 0 0 0 999 0 ]
G [ 154 578 42 999 0 0 0 0 ]
T [ 1 53 832 0 0 999 0 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0711.1 UN0711 1 nhr-1 Caenorhabditis elegans
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: