Detailed information of matrix profile UN0721.1

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Profile summary

Name: tbx-39
Matrix ID: UN0721.1
Class: T-Box factors
Family: TBX6-related factors
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation:
Uniprot ID: Q9NA56  
Source: 25905672
Comment: DBD structure different from canonical TBX. See S. Lambert thesis.

Sequence logo

Frequency matrix

         
A [ 432 0 0 999 999 20 20 63 ]
C [ 72 999 743 0 0 93 20 63 ]
G [ 422 0 0 0 0 864 20 63 ]
T [ 72 0 255 0 0 20 937 810 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0721.1 UN0721 1 tbx-39 Caenorhabditis elegans
TBX6-related factors T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: