Detailed information of matrix profile UN0722.1

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Profile summary

Name: tbx-40
Matrix ID: UN0722.1
Class: T-Box factors
Family: TBX6-related factors
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation:
Uniprot ID: Q9NA55  
Source: 25215497
Comment: DBD structure different from canonical TBX. See S. Lambert thesis.

Sequence logo

Frequency matrix

         
A [ 70 0 0 75 0 157 943 88 ]
C [ 713 0 0 0 0 185 18 464 ]
G [ 70 0 0 923 999 0 18 359 ]
T [ 146 999 999 0 0 657 18 88 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0722.1 UN0722 1 tbx-40 Caenorhabditis elegans
TBX6-related factors T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: