Detailed information of matrix profile UN0727.1

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Profile summary

Name: ztf-11
Matrix ID: UN0727.1
Class: C2HC
Family: MYT
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation:
Uniprot ID: O02274  
Source: 25905672
Comment: Class and TF information inffered based on sequence similarity search using DELTA-BLAST within Nr. database and limiting the search to vertebrates

Sequence logo

Frequency matrix

         
A [ 689 947 986 52 0 13 ]
C [ 120 13 0 933 52 0 ]
G [ 155 13 13 0 0 0 ]
T [ 34 26 0 13 947 986 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0727.1 UN0727 1 ztf-11 Caenorhabditis elegans
MYT C2HC
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: