Detailed information of matrix profile UN0730.1

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Profile summary

Name: F16B12.6
Matrix ID: UN0730.1
Class: Basic helix-loop-helix factors (bHLH)
Family: PAS domain factors
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation:
Uniprot ID: Q93520  
Source: GTRD
Comment: Class and TF information inffered based on sequence similarity search using DELTA-BLAST within Nr. database and limiting the search to vertebrates

Sequence logo

Frequency matrix

         
A [ 69 164 17 8 7 516 438 515 8 519 12 43 106 ]
C [ 40 171 218 3 510 12 27 14 526 9 487 373 66 ]
G [ 61 157 13 518 4 14 35 8 3 5 24 68 329 ]
T [ 373 51 295 14 22 1 43 6 6 10 20 59 42 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0730.1 UN0730 1 F16B12.6 Caenorhabditis elegans
PAS domain factors Basic helix-loop-helix factors (bHLH)
     

-log(P-value) = 53.3575

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Description:

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