Detailed information of matrix profile UN0742.1

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Profile summary

Name: nhr-105
Matrix ID: UN0742.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: yeast 1-hybrid
Validation:
Uniprot ID: Q86PJ4  
Source: 27777270
Comment:

Sequence logo

Frequency matrix

         
A [ 37 43 3 7 0 0 22 100 100 100 15 ]
C [ 0 0 42 92 0 0 69 0 0 0 19 ]
G [ 12 0 7 0 96 92 8 0 0 0 3 ]
T [ 50 56 47 0 4 7 0 0 0 0 62 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0742.1 UN0742 1 nhr-105 Caenorhabditis elegans
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: