Detailed information of matrix profile UN0786.1

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Profile summary

Name: sima
Matrix ID: UN0786.1
Class: Basic helix-loop-helix factors (bHLH)
Family: PAS domain factors
Collection: UNVALIDATED
Taxon: Insects
Species: Drosophila melanogaster
Data Type: bacterial 1-hybrid
Validation:
Uniprot ID: Q24167  
Source: 21097781
Comment:

Sequence logo

Frequency matrix

         
A [ 0 0 0 1000 0 0 0 727 0 ]
C [ 45 0 1000 0 1000 0 45 136 667 ]
G [ 955 91 0 0 0 1000 0 136 143 ]
T [ 0 909 0 0 0 0 955 0 190 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0786.1 UN0786 1 sima Drosophila melanogaster
PAS domain factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: