Detailed information of matrix profile UN0789.1

  1. Home
  2. Matrix > UN0789.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: tai
Matrix ID: UN0789.1
Class: Basic helix-loop-helix factors (bHLH)
Family: PAS domain factors
Collection: UNVALIDATED
Taxon: Insects
Species: Drosophila melanogaster
Data Type: bacterial 1-hybrid
Validation:
Uniprot ID: Q9VLD9  
Source: 21097781
Comment:

Sequence logo

Frequency matrix

         
A [ 619 714 524 0 1000 0 0 0 0 333 95 ]
C [ 0 48 333 1000 0 1000 0 95 95 0 762 ]
G [ 143 0 95 0 0 0 1000 0 905 333 95 ]
T [ 238 238 48 0 0 0 0 905 0 333 48 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0789.1 UN0789 1 tai Drosophila melanogaster
PAS domain factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: