Detailed information of matrix profile UN0834.1

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Profile summary

Name: AT1G74370
Matrix ID: UN0834.1
Class: C3H zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9CA76  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 449 14 145 0 116 928 72 0 14 362 290 478 493 174 348 203 174 536 304 72 ]
C [ 14 319 623 0 0 72 0 986 696 101 145 58 130 304 290 435 159 116 130 507 ]
G [ 116 116 72 101 0 0 14 0 0 130 87 43 29 232 29 58 87 87 43 58 ]
T [ 420 551 159 899 884 0 913 14 290 406 478 420 348 290 333 304 580 261 522 362 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0834.1 UN0834 1 AT1G74370 Arabidopsis thaliana
C3H zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: