Detailed information of matrix profile UN0846.1

  1. Home
  2. Matrix > UN0846.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: AT4G26030
Matrix ID: UN0846.1
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9SZH7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 99 0 1000 172 0 548 994 311 94 ]
C [ 367 676 0 818 1000 50 0 678 597 ]
G [ 57 6 0 0 0 0 0 0 0 ]
T [ 475 316 0 8 0 401 5 10 307 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0846.1 UN0846 1 AT4G26030 Arabidopsis thaliana
C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: