Detailed information of matrix profile UN0853.1

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Profile summary

Name: BHLH157
Matrix ID: UN0853.1
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q7XJU0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 540 550 371 219 233 250 310 439 77 1000 0 0 37 175 334 60 111 ]
C [ 91 67 172 145 273 256 138 131 614 0 1000 0 50 635 23 628 277 ]
G [ 141 195 182 57 114 260 253 128 13 0 0 966 81 20 0 87 67 ]
T [ 226 185 273 577 378 233 297 300 293 0 0 33 831 168 641 222 543 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0853.1 UN0853 1 BHLH157 Arabidopsis thaliana
bHLH Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: