Detailed information of matrix profile UN0868.1

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Profile summary

Name: LBD16
Matrix ID: UN0868.1
Class: Other C4 zinc finger-type factors
Family: LBD
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9SLB7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 60 21 156 78 436 230 11 93 65 210 140 0 13 ]
C [ 673 976 41 178 95 0 73 153 183 515 641 0 256 ]
G [ 261 1 636 566 228 48 15 8 71 190 115 973 693 ]
T [ 5 0 165 176 240 721 900 745 680 85 103 26 36 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0868.1 UN0868 1 LBD16 Arabidopsis thaliana
LBD Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: