Detailed information of matrix profile UN0869.1

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Profile summary

Name: LBD19
Matrix ID: UN0869.1
Class: Other C4 zinc finger-type factors
Family: LBD
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: O22132  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 38 8 151 51 553 286 45 76 56 178 181 0 15 ]
C [ 716 991 43 115 71 18 43 131 215 630 626 5 215 ]
G [ 233 0 626 658 231 28 8 0 5 116 78 976 745 ]
T [ 11 0 178 175 143 666 903 791 723 75 113 18 25 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0869.1 UN0869 1 LBD19 Arabidopsis thaliana
LBD Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: