Detailed information of matrix profile UN0870.1

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Profile summary

Name: LBD2
Matrix ID: UN0870.1
Class: Other C4 zinc finger-type factors
Family: LBD
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9LNB9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 138 158 72 0 15 490 238 380 167 95 237 78 60 3 77 ]
C [ 538 75 720 1000 0 168 225 85 88 308 170 162 925 3 338 ]
G [ 82 245 168 0 907 147 123 83 25 67 197 18 0 947 483 ]
T [ 242 522 40 0 78 195 413 452 720 530 397 742 15 47 102 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0870.1 UN0870 1 LBD2 Arabidopsis thaliana
LBD Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: