Search profile(s)

  1. Home
  2. Search

1407 profile(s) found

Display profiles
ID Name Species Class Family Logo
MA0955.1 POPTR_0002s00440g Populus trichocarpa
 C2H2 zinc finger factors SBP
MA0955.2 POPTR_0002s00440g Populus trichocarpa
 C3H(C),C2HC zinc fingers factors SBP
MA0956.1 BEE2 Arabidopsis thaliana
 Basic helix-loop-helix factors (bHLH)
MA0956.2 BEE2 Arabidopsis thaliana
 Basic helix-loop-helix factors (bHLH) bHLH
MA0957.1 BHLH3 Arabidopsis thaliana
 Basic helix-loop-helix factors (bHLH) bHLH
MA0958.1 BHLH13 Arabidopsis thaliana
 Basic helix-loop-helix factors (bHLH) bHLH
MA0959.1 AIB Arabidopsis thaliana
 Basic helix-loop-helix factors (bHLH) bHLH
MA0960.1 BHLH104 Arabidopsis thaliana
 Basic helix-loop-helix factors (bHLH) bHLH
MA0961.1 BHLH112 Oryza sativa Japonica Group
 Basic helix-loop-helix factors (bHLH)
MA0961.2 bHLH112 Oryza sativa Japonica Group
 Basic helix-loop-helix factors (bHLH) bHLH
Showing 10 profiles of page 16 from 141 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.